Publications

Selected Publications

  1. Atakay, M., Aksakal, F., Bozkaya, U., Salih, B., & Wesdemiotis, C. (2020). Conformational Characterization of Polyelectrolyte Oligomers and Their Noncovalent Complexes Using Ion Mobility-Mass Spectrometry. Journal of the American Society for Mass Spectrometry.
  2. Ülkü, Ö., Atakay, M., Kohneshahri, M. Y., Uzun, C., & Salih, B. (2020). Site-Specific characterization of peptide-polymer conjugates in various stoichiometries by MALDI-Tandem mass spectrometry. Microchemical Journal, 152, 104467.
  3. Bayramoglu, G., Kayili, H. M., Oztekin, M., Salih, B., & Arica, M. Y. (2020). Hydrophilic spacer-arm containing magnetic nanoparticles for immobilization of proteinase K: Employment for speciation of proteins for mass spectrometry-based analysis. Talanta, 206, 120218.
  4. Koçak, Ö. F., Kayili, H. M., Albayrak, M., Yaman, M. E., Kadıoğlu, Y., & Salih, B. (2019). N-glycan profiling of papillary thyroid carcinoma tissues by MALDI-TOF-MS. Analytical biochemistry, 584, 113389.
  5. Bayramoglu, G., Kayili, H. M., Oztekin, M., Salih, B., & Arica, M. Y. (2020). Hydrophilic spacer-arm containing magnetic nanoparticles for immobilization of proteinase K: Employment for speciation of proteins for mass spectrometry-based analysis. Talanta, 206, 120218.
  6. Çatıker, E., Meyvacı, E., Atakay, M., Salih, B., & Öztürk, T. (2019). Synthesis and characterization of amphiphilic triblock copolymers including β-alanine/α-methyl-β-alanine and ethylene glycol by “click” chemistry. Polymer Bulletin, 76(4), 2113-2128.
  7. Bayramoglu, G., Ozalp, C., Oztekin, M., Guler, U., Salih, B., & Arica, M. Y. (2019). Design of an aptamer-based magnetic adsorbent and biosensor systems for selective and sensitive separation and detection of thrombin. Talanta, 191, 59-66.
  8. Wei, B., Gerislioglu, S., Atakay, M., Salih, B., & Wesdemiotis, C. (2019). Characterization of supramolecular peptide-polymer bioconjugates using multistage tandem mass spectrometry. International Journal of Mass Spectrometry, 436, 130-136.
  9. Stavenhagen, K., Kayili, H. M., Holst, S., Koeleman, C. A., Engel, R., Wouters, D., Zeerleder,S., Salih B., & Wuhrer, M. (2018). N-and O-glycosylation analysis of human C1-inhibitor reveals extensive mucin-type O-glycosylation. Molecular & Cellular Proteomics, 17(6), 1225-1238.
  10. Kayili, H. M., Barlas, N., Atakay, M., & Salih, B. (2018). Fast purification of glycans and glycopeptides using silk-packed micropipette tip for matrix-assisted laser desorption/ionization-mass spectrometry and high-performance liquid chromatography-fluorescence detection analysis. Microchemical Journal, 139, 492-499.
  11. Atakay, M., Çelikbıçak, Ö., & Salih, B. (2018). Use of Sulfonates as Desorption Agents for Phosphopeptide Elution from an Anion-exchange Material. Analytical Letters, 51(5), 760-772.
  12. Çatıker, E., Meyvacı, E., Atakay, M., Salih, B., & Öztürk, T. (2018). Synthesis and characterization of amphiphilic triblock copolymers including β-alanine/α-methyl-β-alanine and ethylene glycol by “click” chemistry. Polymer Bulletin, 1-16.
  13. Arica, M. Y., Salih, B., Celikbicak, O., & Bayramoglu, G. (2017). Immobilization of laccase on the fibrous polymer-grafted film and study of textile dye degradation by MALDI–ToF-MS. Chemical Engineering Research and Design, 128, 107-119.
  14.  Salimi, K., Usta, D. D., Çelikbıçak, Ö., Pınar, A., Salih, B., & Tuncel, A. (2017). Highly selective enrichment of phosphopeptides by titanium (IV) attached monodisperse-porous poly (vinylphosphonic acid-co-ethylene dimethacrylate) microspheres. Journal of Chromatography A, 1496, 9-19.
  15. Koçyiğit, N., Özen, Ü. E., Özer, M., Salih, B., Özkaya, A. R., & Bekaroğlu, Ö. (2017). Electrocatalytic Activity of Novel Ball-Type Metallophthalocyanines with Trifluoro Methyl Linkages in Oxygen Reduction Reaction and Application as Zn-Air Battery Cathode Catalyst. Electrochimica Acta, 233, 237-248.
  16. Akıllıoğlu, H. G., Çelikbıçak, Ö., Salih, B., & Gökmen, V. (2017). Monitoring protein glycation by electrospray ionization (ESI) quadrupole time-of-flight (Q-TOF) mass spectrometer. Food Chemistry, 217, 65-73.
  17. Kayili, H. M., & Salih, B. (2016). Fast and efficient proteolysis by reusable pepsin-encapsulated magnetic sol-gel material for mass spectrometry-based proteomics applications. Talanta, 155, 78-86.
  18. Kavruk, M., Celikbicak, O., Ozalp, V. C., Borsa, B. A., Hernandez, F. J., Bayramoglu, G., Salih, B., & Arica, M. Y. (2015). Antibiotic loaded nanocapsules functionalized with aptamer gates for targeted destruction of pathogens. Chemical Communications, 51(40), 8492-8495.
  19. Pekdemir, F., Kurnalı, S., Şengül, A., Altındal, A., Özkaya, A. R., Salih, B., & Bekaroğlu, Ö. (2015). A conformationally stressed novel ball-type perylenediimide appended zinc (II) phthalocyanine hybrid: spectroelectrochemical, electrocolorimetric and photovoltaic properties. Dalton Transactions, 44(1), 158-166.
  20. Çelikbıçak, Ö., Salih, B., & Wesdemiotis, C. (2014). Strong ionic interactions in noncovalent complexes between poly (ethylene imine), a cationic electrolyte, and Cibacron Blue, a nucleotide mimic–implications for oligonucleotide vectors. Journal of Mass Spectrometry, 49(7), 597-607.
  21. Özer, L. M., Özer, M., Altındal, A., Özkaya, A. R., Salih, B., & Bekaroğlu, Ö. (2013). Synthesis, characterization, OFET and electrochemical properties of novel dimeric metallophthalocyanines. Dalton Transactions, 42(18), 6633-6644.
  22. Çelikbıçak, Ö., Atakay, M., Güler, Ü., & Salih, B. (2013). A novel tantalum-based sol–gel packed microextraction syringe for highly specific enrichment of phosphopeptides in MALDI-MS applications. Analyst, 138(15), 4403-4410.
  23. Çelikbıçak, Ö., Demirel, G., Pişkin, E., & Salih, B. (2012). Small molecule analysis using laser desorption/ionization mass spectrometry on nano-coated silicon with self-assembled monolayers. Analytica chimica acta, 729, 54-61.
  24. Atakay, M., Çelikbıçak, O., & Salih, B. (2012). Amine-functionalized sol–gel-based lab-in-a-pipet-tip approach for the fast enrichment and specific purification of phosphopeptides in MALDI-MS applications. Analytical chemistry, 84(6), 2713-2720.
  25. Salih, B., Sipahi, T., & Dönmez, E. O. (2009). Ancient nigella seeds from Boyalı Höyük in north-central Turkey. Journal of ethnopharmacology, 124(3), 416-420.
  26. Koru, O., Toksoy, F., Acikel, C. H., Tunca, Y. M., Baysallar, M., Guclu, A. U., Akça, E., Ozkok, A., Sorkun, K., Tanyuksel, M., & Salih, B. (2007). In vitro antimicrobial activity of propolis samples from different geographical origins against certain oral pathogens. Anaerobe, 13(3), 140-145.
  27. Tuncel, D., Özsar, Ö., Tiftik, H. B., & Salih, B. (2007). Molecular switch based on a cucurbit [6] uril containing bistable [3] rotaxane. Chemical Communications, (13), 1369-1371.
  28. Erdag, B., Balcioglu, K. B., Kumbasar, A., Celikbicak, O., Zeder-Lutz, G., Altschuh, D., Salih, B., & Baysal, K. (2007). Novel short peptides isolated from phage display library inhibit vascular endothelial growth factor activity. Molecular biotechnology, 35(1), 51-63.
  29. Ceyhan, T., Altindal, A., Özkaya, A. R., Erbil, M. K., Salih, B., & Bekaroğlu, Ö. (2006). Synthesis, characterization, and electrical, electrochemical and gas sensing properties of a novel ball-type four t-butylcalix [4] arene bridged binuclear zinc (II) phthalocyanine. Chemical communications, (3), 320-322.
  30. Lehmann, E., Salih, B., Gómez-López, M., Diederich, F., & Zenobi, R. (2000). Do matrix-assisted laser desorption/ionization mass spectra reflect solution-phase formation of cyclodextrin inclusion complexes?. Analyst, 125(5), 849-854.
  31. Salih, B., Masselon, C., & Zenobi, R. (1998). Matrix‐assisted laser desorption/ionization mass spectrometry of noncovalent protein–transition metal ion complexes. Journal of mass spectrometry, 33(10), 994-1002.
  32. Salih, B., & Zenobi, R. (1998). MALDI mass spectrometry of dye-peptide and dye-protein complexes. Analytical chemistry, 70(8), 1536-1543.